Spatial transcriptomics analysis service
Spatial data is not "single-cell with coordinates". What is valid depends on whether your unit is a cell or a mixture — and we say which, in writing, before starting.
Indicative: $550–$1400 per slide/section
Fixed written price before any work starts · typical turnaround 5–8 working days · six months of reviewer-driven revisions included
What is included
- Per-section QC and clustering, with results shown on the tissue rather than only in UMAP space.
- Spatially variable genes by spatial autocorrelation, interpreted against structures you can name.
- Deconvolution against a matched single-cell reference, with the reference stated — a missing cell type in the reference becomes a false finding in the result.
- Neighbourhood statistics tested against a null model that preserves tissue shape.
- Sections treated as the unit of replication, not spots.
See it done
Run on public data, with the script downloadable.
Before you commit
Run the free QC report on your own data — no sign-up,
and your file is deleted once the report is built — typically within a couple of minutes. Or build a plan to see whether your design
supports the comparison you have in mind; it will tell you when it does not.
Related reading
→ Get a fixed quote · all sample deliverables